Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Crocinitomicaceae
Genus
Lishizhenia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Crocinitomicaceae |
| Genus | Lishizhenia |
| Species | Lishizhenia tianjinensis |
| Strain | strain CGMCC 1.7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1119994 bp
Thymine Count
1112369 bp
Guanine Count
662572 bp
Cytosine Count
671002 bp
Genome Length
3567068 bp
Protein-coding Genes
3112 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase catalytic domain | SAMN05216474_0843 | Not Available | Negative | 883482 - 884234 | 28264.5 |
| peptide chain release factor 3 | SAMN05216474_0844 | Not Available | Positive | 884439 - 886031 | 59759.4 |
| hypothetical protein | SAMN05216474_0845 | Not Available | Positive | 886267 - 887064 | 30358.6 |
| hopj type iii effector protein | SAMN05216474_0846 | Not Available | Positive | 887185 - 887529 | 12953.2 |
| hypothetical protein | SAMN05216474_0847 | Not Available | Positive | 887659 - 888495 | 32791.9 |
| hypothetical protein | SAMN05216474_0848 | Not Available | Negative | 888545 - 888967 | 15977.9 |
| por secretion system c-terminal sorting domain-containing protein | SAMN05216474_0849 | Not Available | Negative | 889025 - 891553 | 90767.8 |
| subtilase family protein | SAMN05216474_0850 | Not Available | Positive | 891691 - 893361 | 60947.3 |
| hypothetical protein | SAMN05216474_0851 | Not Available | Positive | 893469 - 894548 | 41494.8 |
| hypothetical protein | SAMN05216474_0852 | Not Available | Negative | 894550 - 894990 | 17115.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
