Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Crocinitomicaceae
Genus
Lishizhenia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Crocinitomicaceae |
| Genus | Lishizhenia |
| Species | Lishizhenia tianjinensis |
| Strain | strain CGMCC 1.7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1119994 bp
Thymine Count
1112369 bp
Guanine Count
662572 bp
Cytosine Count
671002 bp
Genome Length
3567068 bp
Protein-coding Genes
3112 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN05216474_0671 | Not Available | Positive | 685156 - 686040 | 32311.8 |
| ph domain-containing protein | SAMN05216474_0672 | Not Available | Negative | 686087 - 686557 | 18161.6 |
| hypothetical protein | SAMN05216474_0673 | Not Available | Positive | 686636 - 687115 | 18590.4 |
| putative transcriptional regulator | SAMN05216474_0674 | Not Available | Positive | 687105 - 687308 | 7517.19 |
| peptidase family m28 | SAMN05216474_0675 | Not Available | Negative | 687305 - 688300 | 38122.0 |
| arac-type dna-binding protein | SAMN05216474_0676 | Not Available | Positive | 688342 - 689193 | 33492.0 |
| protein of unknown function | SAMN05216474_0677 | Not Available | Negative | 689201 - 689497 | 11266.9 |
| dna replication and repair protein recf | SAMN05216474_0678 | Not Available | Negative | 689490 - 690602 | 43681.5 |
| branched-chain amino acid aminotransferase | SAMN05216474_0679 | Not Available | Negative | 690603 - 691475 | 32457.0 |
| rhomboid family protein | SAMN05216474_0680 | Not Available | Negative | 691475 - 692098 | 23781.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
