Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Crocinitomicaceae
Genus
Lishizhenia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Crocinitomicaceae |
| Genus | Lishizhenia |
| Species | Lishizhenia tianjinensis |
| Strain | strain CGMCC 1.7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1119994 bp
Thymine Count
1112369 bp
Guanine Count
662572 bp
Cytosine Count
671002 bp
Genome Length
3567068 bp
Protein-coding Genes
3112 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN05216474_0602 | Not Available | Negative | 609217 - 610659 | 53298.7 |
| helix-turn-helix domain-containing protein | SAMN05216474_0603 | Not Available | Negative | 610958 - 611806 | 33077.5 |
| hypothetical protein | SAMN05216474_0604 | Not Available | Negative | 611921 - 612307 | 14324.8 |
| por secretion system c-terminal sorting domain-containing protein | SAMN05216474_0605 | Not Available | Negative | 612617 - 614002 | 51057.2 |
| por secretion system c-terminal sorting domain-containing protein | SAMN05216474_0606 | Not Available | Negative | 614160 - 615587 | 53663.1 |
| Tmrna,resume consensus sequence (at 91): gataattgacaacacgtc | Not Available | Not Available | Positive | 615851 - 616253 | Not Available |
| carboxypepd_reg-like domain-containing protein | SAMN05216474_0607 | Not Available | Positive | 616513 - 617913 | 53917.4 |
| pif1-like helicase | SAMN05216474_0608 | Not Available | Positive | 618359 - 619690 | 49670.9 |
| hypothetical protein | SAMN05216474_0609 | Not Available | Positive | 619893 - 620603 | 26809.6 |
| hypothetical protein | SAMN05216474_0610 | Not Available | Positive | 620600 - 621145 | 21116.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
