Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Crocinitomicaceae
Genus
Lishizhenia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Crocinitomicaceae |
| Genus | Lishizhenia |
| Species | Lishizhenia tianjinensis |
| Strain | strain CGMCC 1.7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1119994 bp
Thymine Count
1112369 bp
Guanine Count
662572 bp
Cytosine Count
671002 bp
Genome Length
3567068 bp
Protein-coding Genes
3112 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05216474_0502 | Not Available | Positive | 520885 - 521517 | 24713.7 |
| nitroreductase | SAMN05216474_0503 | Not Available | Positive | 521579 - 522211 | 23630.1 |
| fumarylacetoacetate hydrolase | SAMN05216474_0504 | Not Available | Negative | 522291 - 523562 | 47452.5 |
| glycine hydroxymethyltransferase | SAMN05216474_0505 | Not Available | Negative | 523572 - 524843 | 45994.1 |
| udp-glucose 4-epimerase | SAMN05216474_0506 | Not Available | Negative | 524847 - 525764 | 34288.9 |
| cell wall-associated hydrolase, nlpc family | SAMN05216474_0507 | Not Available | Negative | 525822 - 526586 | 28494.0 |
| dinb superfamily protein | SAMN05216474_0508 | Not Available | Negative | 526590 - 527210 | 24328.6 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN05216474_0509 | Not Available | Positive | 527343 - 528107 | 27870.4 |
| hypothetical protein | SAMN05216474_0510 | Not Available | Positive | 528111 - 528413 | 11623.6 |
| lipid-a-disaccharide synthase | SAMN05216474_0511 | Not Available | Positive | 528416 - 529528 | 41974.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
