Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Crocinitomicaceae
Genus
Lishizhenia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Crocinitomicaceae |
| Genus | Lishizhenia |
| Species | Lishizhenia tianjinensis |
| Strain | strain CGMCC 1.7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1119994 bp
Thymine Count
1112369 bp
Guanine Count
662572 bp
Cytosine Count
671002 bp
Genome Length
3567068 bp
Protein-coding Genes
3112 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein hu-beta | SAMN05216474_0402 | Not Available | Negative | 420482 - 420754 | 9496.36 |
| methionyl-trna formyltransferase | SAMN05216474_0403 | Not Available | Negative | 421070 - 422029 | 35797.3 |
| putative efflux protein, mate family | SAMN05216474_0404 | Not Available | Negative | 422029 - 423357 | 49556.9 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN05216474_0405 | Not Available | Negative | 423357 - 424526 | 43502.1 |
| hypothetical protein | SAMN05216474_0406 | Not Available | Positive | 424751 - 425185 | 16448.1 |
| abc transporter | SAMN05216474_0407 | Not Available | Positive | 425178 - 426104 | 35147.1 |
| membrane protein | SAMN05216474_0408 | Not Available | Positive | 426097 - 426981 | 32621.8 |
| transcriptional regulator, contains xre-family hth domain | SAMN05216474_0409 | Not Available | Positive | 427065 - 427865 | 30268.4 |
| protein of unknown function, duf481 | SAMN05216474_0410 | Not Available | Negative | 427982 - 428935 | 35439.9 |
| acetyl-coa c-acetyltransferase | SAMN05216474_0411 | Not Available | Positive | 429112 - 430290 | 40598.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
