Lishizhenia tianjinensis strain CGMCC 1.7005

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Crocinitomicaceae

Genus

Lishizhenia

Description

Lishizhenia tianjinensis strain CGMCC 1.7005 is characterized by having a single replicon, which is a notable feature for its genomic structure. The strain is cataloged under the accession number FPAS00000000.1, indicating its availability for further study and reference in microbial databases. This strain belongs to the genus Lishizhenia, which is part of the broader classification of bacteria. While specific metabolic capabilities, ecological roles, or pathogenic potential of Lishizhenia tianjinensis strain CGMCC 1.7005 are not provided, the presence of a single replicon suggests a streamlined genome that might be indicative of specialized adaptations to its environment. The unique genomic trait of having one replicon may also reflect evolutionary strategies that allow for efficient replication and resource usage, potentially providing insights into how this strain interacts with its ecological niche. Understanding the genomic architecture of Lishizhenia tianjinensis can contribute to broader ecological studies, particularly in examining how bacteria with simplified genomic structures adapt to specific environments. This could lead to a better understanding of microbial diversity and functioning in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyCrocinitomicaceae
GenusLishizhenia
SpeciesLishizhenia tianjinensis
Strainstrain CGMCC 1.7005

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lishizhenia tianjinensis strain CGMCC 1.7005 genome assembly,

Gene Summary

Adenine Count

1119994 bp

Thymine Count

1112369 bp

Guanine Count

662572 bp

Cytosine Count

671002 bp

Genome Length

3567068 bp

Protein-coding Genes

3112 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05216474_0020Not AvailablePositive18614 - 1922823424.9
diaminopimelate epimeraseSAMN05216474_0021Not AvailablePositive19225 - 2000128417.5
hypothetical proteinSAMN05216474_0022Not AvailablePositive19991 - 2049719370.4
diamine n-acetyltransferaseSAMN05216474_0023Not AvailablePositive20481 - 2101120715.5
upf0755 proteinSAMN05216474_0024Not AvailablePositive21001 - 2206540589.9
l-asparaginase/n4-(beta-n-acetylglucosaminyl)-l- asparaginaseSAMN05216474_0025Not AvailablePositive22070 - 2305635593.6
beta-mannosidaseSAMN05216474_0026Not AvailablePositive23050 - 2545592302.6
protein of unknown functionSAMN05216474_0027Not AvailablePositive25455 - 2591618440.0
acetyl-coa carboxylase, carboxyltransferase componentSAMN05216474_0028Not AvailableNegative25932 - 2757559606.8
hypothetical proteinSAMN05216474_0029Not AvailablePositive27907 - 2829314594.8

Displaying genes 21 – 30 of 1922 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.