Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Crocinitomicaceae
Genus
Lishizhenia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Crocinitomicaceae |
| Genus | Lishizhenia |
| Species | Lishizhenia tianjinensis |
| Strain | strain CGMCC 1.7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1119994 bp
Thymine Count
1112369 bp
Guanine Count
662572 bp
Cytosine Count
671002 bp
Genome Length
3567068 bp
Protein-coding Genes
3112 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolyl-trna synthetase | SAMN05216474_0211 | Not Available | Positive | 235059 - 236531 | 55672.1 |
| hypothetical protein | SAMN05216474_0212 | Not Available | Positive | 236561 - 237241 | 26241.6 |
| Trna-glu | Not Available | Not Available | Positive | 237334 - 237405 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 237496 - 237567 | Not Available |
| ssu ribosomal protein s20p | SAMN05216474_0215 | Not Available | Positive | 237600 - 237851 | 9425.51 |
| uracil-dna glycosylase | SAMN05216474_0216 | Not Available | Positive | 237913 - 238575 | 24776.3 |
| uroporphyrinogen decarboxylase | SAMN05216474_0217 | Not Available | Positive | 238656 - 239687 | 38442.4 |
| outer membrane protein ompa | SAMN05216474_0218 | Not Available | Positive | 239698 - 240876 | 43511.6 |
| calcineurin-like phosphoesterase | SAMN05216474_0219 | Not Available | Negative | 241208 - 242368 | 44471.5 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN05216474_0220 | Not Available | Negative | 242539 - 242970 | 15705.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
