Lishizhenia tianjinensis strain CGMCC 1.7005

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Crocinitomicaceae

Genus

Lishizhenia

Description

Lishizhenia tianjinensis strain CGMCC 1.7005 is characterized by having a single replicon, which is a notable feature for its genomic structure. The strain is cataloged under the accession number FPAS00000000.1, indicating its availability for further study and reference in microbial databases. This strain belongs to the genus Lishizhenia, which is part of the broader classification of bacteria. While specific metabolic capabilities, ecological roles, or pathogenic potential of Lishizhenia tianjinensis strain CGMCC 1.7005 are not provided, the presence of a single replicon suggests a streamlined genome that might be indicative of specialized adaptations to its environment. The unique genomic trait of having one replicon may also reflect evolutionary strategies that allow for efficient replication and resource usage, potentially providing insights into how this strain interacts with its ecological niche. Understanding the genomic architecture of Lishizhenia tianjinensis can contribute to broader ecological studies, particularly in examining how bacteria with simplified genomic structures adapt to specific environments. This could lead to a better understanding of microbial diversity and functioning in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyCrocinitomicaceae
GenusLishizhenia
SpeciesLishizhenia tianjinensis
Strainstrain CGMCC 1.7005

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lishizhenia tianjinensis strain CGMCC 1.7005 genome assembly,

Gene Summary

Adenine Count

1119994 bp

Thymine Count

1112369 bp

Guanine Count

662572 bp

Cytosine Count

671002 bp

Genome Length

3567068 bp

Protein-coding Genes

3112 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fe-s cluster biogenesis protein nfua, 4fe-4s-binding domainSAMN05216474_1808Not AvailablePositive2021370 - 202197522229.7
atp-dependent dna helicase recqSAMN05216474_1809Not AvailablePositive2022115 - 202429282966.2
methyltransferase domain-containing proteinSAMN05216474_1810Not AvailablePositive2024464 - 202551939159.1
gliding motility-associated c-terminal domain-containing proteinSAMN05216474_1811Not AvailableNegative2025572 - 202738967881.2
hypothetical proteinSAMN05216474_1812Not AvailableNegative2027470 - 202783514115.5
3-phosphoshikimate 1-carboxyvinyltransferaseSAMN05216474_1813Not AvailableNegative2027869 - 202908044968.5
hypothetical proteinSAMN05216474_1814Not AvailableNegative2029083 - 202955317668.4
hypothetical proteinSAMN05216474_1815Not AvailableNegative2029553 - 203080947540.1
primary replicative dna helicaseSAMN05216474_1816Not AvailableNegative2030844 - 203240958353.8
excinuclease abc, a subunitSAMN05216474_1817Not AvailablePositive2032705 - 2037186166148.0

Displaying genes 1801 – 1810 of 1922 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.