Lishizhenia tianjinensis strain CGMCC 1.7005

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Crocinitomicaceae

Genus

Lishizhenia

Description

Lishizhenia tianjinensis strain CGMCC 1.7005 is characterized by having a single replicon, which is a notable feature for its genomic structure. The strain is cataloged under the accession number FPAS00000000.1, indicating its availability for further study and reference in microbial databases. This strain belongs to the genus Lishizhenia, which is part of the broader classification of bacteria. While specific metabolic capabilities, ecological roles, or pathogenic potential of Lishizhenia tianjinensis strain CGMCC 1.7005 are not provided, the presence of a single replicon suggests a streamlined genome that might be indicative of specialized adaptations to its environment. The unique genomic trait of having one replicon may also reflect evolutionary strategies that allow for efficient replication and resource usage, potentially providing insights into how this strain interacts with its ecological niche. Understanding the genomic architecture of Lishizhenia tianjinensis can contribute to broader ecological studies, particularly in examining how bacteria with simplified genomic structures adapt to specific environments. This could lead to a better understanding of microbial diversity and functioning in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyCrocinitomicaceae
GenusLishizhenia
SpeciesLishizhenia tianjinensis
Strainstrain CGMCC 1.7005

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lishizhenia tianjinensis strain CGMCC 1.7005 genome assembly,

Gene Summary

Adenine Count

1119994 bp

Thymine Count

1112369 bp

Guanine Count

662572 bp

Cytosine Count

671002 bp

Genome Length

3567068 bp

Protein-coding Genes

3112 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein beta-barrel domain-containing proteinSAMN05216474_1436Not AvailableNegative1567193 - 156803231495.8
hypothetical proteinSAMN05216474_1437Not AvailableNegative1568710 - 156973238113.4
rna polymerase sigma-70 factor, ecf subfamilySAMN05216474_1438Not AvailableNegative1569729 - 157021718718.2
four helix bundle proteinSAMN05216474_1439Not AvailableNegative1570310 - 157070215216.2
dna repair protein rada/smsSAMN05216474_1440Not AvailablePositive1570994 - 157235550045.6
1-deoxy-d-xylulose-5-phosphate synthaseSAMN05216474_1441Not AvailableNegative1573007 - 157495671281.6
legume lectin domain-containing proteinSAMN05216474_1442Not AvailablePositive1575517 - 157788983315.2
por secretion system c-terminal sorting domain-containing proteinSAMN05216474_1443Not AvailablePositive1578007 - 158090799903.4
hypothetical proteinSAMN05216474_1444Not AvailableNegative1581084 - 158281763278.3
transcriptional regulator, lyttr familySAMN05216474_1446Not AvailablePositive1584004 - 158480430244.3

Displaying genes 1431 – 1440 of 1922 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.