Lishizhenia tianjinensis strain CGMCC 1.7005

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Crocinitomicaceae

Genus

Lishizhenia

Description

Lishizhenia tianjinensis strain CGMCC 1.7005 is characterized by having a single replicon, which is a notable feature for its genomic structure. The strain is cataloged under the accession number FPAS00000000.1, indicating its availability for further study and reference in microbial databases. This strain belongs to the genus Lishizhenia, which is part of the broader classification of bacteria. While specific metabolic capabilities, ecological roles, or pathogenic potential of Lishizhenia tianjinensis strain CGMCC 1.7005 are not provided, the presence of a single replicon suggests a streamlined genome that might be indicative of specialized adaptations to its environment. The unique genomic trait of having one replicon may also reflect evolutionary strategies that allow for efficient replication and resource usage, potentially providing insights into how this strain interacts with its ecological niche. Understanding the genomic architecture of Lishizhenia tianjinensis can contribute to broader ecological studies, particularly in examining how bacteria with simplified genomic structures adapt to specific environments. This could lead to a better understanding of microbial diversity and functioning in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyCrocinitomicaceae
GenusLishizhenia
SpeciesLishizhenia tianjinensis
Strainstrain CGMCC 1.7005

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lishizhenia tianjinensis strain CGMCC 1.7005 genome assembly,

Gene Summary

Adenine Count

1119994 bp

Thymine Count

1112369 bp

Guanine Count

662572 bp

Cytosine Count

671002 bp

Genome Length

3567068 bp

Protein-coding Genes

3112 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbamoyl-phosphate synthase large subunitSAMN05216474_1426Not AvailablePositive1553390 - 155435537274.0
putative hydrolase of the had superfamilySAMN05216474_1427Not AvailablePositive1554348 - 155499825303.1
aminotransferase, llpsf_nht_00031 familySAMN05216474_1428Not AvailablePositive1555001 - 155615542727.1
polysaccharide biosynthesis proteinSAMN05216474_1429Not AvailablePositive1556223 - 155743445816.9
sugar transferase involved in lps biosynthesis (colanic, teichoic acid)SAMN05216474_1430Not AvailablePositive1557489 - 155816025576.6
udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferaseSAMN05216474_1431Not AvailablePositive1558197 - 155930041602.3
polysaccharide export outer membrane proteinSAMN05216474_1432Not AvailablePositive1559356 - 156014729276.5
capsular exopolysaccharide familySAMN05216474_1433Not AvailablePositive1560149 - 156254590307.9
tryptophanyl-trna synthetaseSAMN05216474_1434Not AvailablePositive1564694 - 156566236213.3
hypothetical proteinSAMN05216474_1435Not AvailableNegative1566482 - 156683513848.8

Displaying genes 1421 – 1430 of 1922 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.