Lishizhenia tianjinensis strain CGMCC 1.7005

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Crocinitomicaceae

Genus

Lishizhenia

Description

Lishizhenia tianjinensis strain CGMCC 1.7005 is characterized by having a single replicon, which is a notable feature for its genomic structure. The strain is cataloged under the accession number FPAS00000000.1, indicating its availability for further study and reference in microbial databases. This strain belongs to the genus Lishizhenia, which is part of the broader classification of bacteria. While specific metabolic capabilities, ecological roles, or pathogenic potential of Lishizhenia tianjinensis strain CGMCC 1.7005 are not provided, the presence of a single replicon suggests a streamlined genome that might be indicative of specialized adaptations to its environment. The unique genomic trait of having one replicon may also reflect evolutionary strategies that allow for efficient replication and resource usage, potentially providing insights into how this strain interacts with its ecological niche. Understanding the genomic architecture of Lishizhenia tianjinensis can contribute to broader ecological studies, particularly in examining how bacteria with simplified genomic structures adapt to specific environments. This could lead to a better understanding of microbial diversity and functioning in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyCrocinitomicaceae
GenusLishizhenia
SpeciesLishizhenia tianjinensis
Strainstrain CGMCC 1.7005

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lishizhenia tianjinensis strain CGMCC 1.7005 genome assembly,

Gene Summary

Adenine Count

1119994 bp

Thymine Count

1112369 bp

Guanine Count

662572 bp

Cytosine Count

671002 bp

Genome Length

3567068 bp

Protein-coding Genes

3112 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ompa-ompf porin, oop familySAMN05216474_1405Not AvailableNegative1529591 - 153087746984.7
udp-n-acetyl-d-galactosamine dehydrogenaseSAMN05216474_1407Not AvailablePositive1532280 - 153356046933.4
glucose-6-phosphate isomeraseSAMN05216474_1408Not AvailablePositive1533576 - 153499753859.3
udp-n-acetylglucosamine 2-epimeraseSAMN05216474_1409Not AvailablePositive1534994 - 153613642244.2
udp-n-acetyl-d-mannosaminuronic acid dehydrogenaseSAMN05216474_1410Not AvailablePositive1536081 - 153736447607.4
dtdp-glucose 4,6-dehydrataseSAMN05216474_1411Not AvailablePositive1537439 - 153846438869.9
glucose-1-phosphate thymidylyltransferaseSAMN05216474_1412Not AvailablePositive1538482 - 153935432492.3
membrane protein involved in the export of o-antigen and teichoic acidSAMN05216474_1413Not AvailablePositive1539355 - 154079454193.5
dtdp-4-amino-4,6-dideoxygalactose transaminaseSAMN05216474_1414Not AvailablePositive1540791 - 154187040529.0
biotin carboxylaseSAMN05216474_1415Not AvailablePositive1541907 - 154310644739.3

Displaying genes 1401 – 1410 of 1922 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.