Lishizhenia tianjinensis strain CGMCC 1.7005

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Crocinitomicaceae

Genus

Lishizhenia

Description

Lishizhenia tianjinensis strain CGMCC 1.7005 is characterized by having a single replicon, which is a notable feature for its genomic structure. The strain is cataloged under the accession number FPAS00000000.1, indicating its availability for further study and reference in microbial databases. This strain belongs to the genus Lishizhenia, which is part of the broader classification of bacteria. While specific metabolic capabilities, ecological roles, or pathogenic potential of Lishizhenia tianjinensis strain CGMCC 1.7005 are not provided, the presence of a single replicon suggests a streamlined genome that might be indicative of specialized adaptations to its environment. The unique genomic trait of having one replicon may also reflect evolutionary strategies that allow for efficient replication and resource usage, potentially providing insights into how this strain interacts with its ecological niche. Understanding the genomic architecture of Lishizhenia tianjinensis can contribute to broader ecological studies, particularly in examining how bacteria with simplified genomic structures adapt to specific environments. This could lead to a better understanding of microbial diversity and functioning in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyCrocinitomicaceae
GenusLishizhenia
SpeciesLishizhenia tianjinensis
Strainstrain CGMCC 1.7005

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lishizhenia tianjinensis strain CGMCC 1.7005 genome assembly,

Gene Summary

Adenine Count

1119994 bp

Thymine Count

1112369 bp

Guanine Count

662572 bp

Cytosine Count

671002 bp

Genome Length

3567068 bp

Protein-coding Genes

3112 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two component transcriptional regulator, luxr familySAMN05216474_1235Not AvailableNegative1333634 - 133430824716.8
hypothetical proteinSAMN05216474_1236Not AvailableNegative1334366 - 133483917841.3
protein of unknown functionSAMN05216474_1237Not AvailableNegative1334842 - 133563029063.5
outer membrane receptor proteins, mostly fe transportSAMN05216474_1238Not AvailableNegative1335632 - 133796887594.3
trna pseudouridine38-40 synthaseSAMN05216474_1239Not AvailableNegative1338060 - 133882129283.2
camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinasesSAMN05216474_1240Not AvailableNegative1338858 - 133955026511.3
aldo/keto reductaseSAMN05216474_1241Not AvailableNegative1339668 - 134046830681.8
hypothetical proteinSAMN05216474_1242Not AvailableNegative1340458 - 134103322466.0
transglutaminase-like superfamily proteinSAMN05216474_1243Not AvailablePositive1341183 - 134183925291.6
hypothetical proteinSAMN05216474_1244Not AvailableNegative1341836 - 134232118494.4

Displaying genes 1231 – 1240 of 1922 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.