Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Crocinitomicaceae
Genus
Lishizhenia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Crocinitomicaceae |
| Genus | Lishizhenia |
| Species | Lishizhenia tianjinensis |
| Strain | strain CGMCC 1.7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1119994 bp
Thymine Count
1112369 bp
Guanine Count
662572 bp
Cytosine Count
671002 bp
Genome Length
3567068 bp
Protein-coding Genes
3112 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, luxr family | SAMN05216474_1235 | Not Available | Negative | 1333634 - 1334308 | 24716.8 |
| hypothetical protein | SAMN05216474_1236 | Not Available | Negative | 1334366 - 1334839 | 17841.3 |
| protein of unknown function | SAMN05216474_1237 | Not Available | Negative | 1334842 - 1335630 | 29063.5 |
| outer membrane receptor proteins, mostly fe transport | SAMN05216474_1238 | Not Available | Negative | 1335632 - 1337968 | 87594.3 |
| trna pseudouridine38-40 synthase | SAMN05216474_1239 | Not Available | Negative | 1338060 - 1338821 | 29283.2 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05216474_1240 | Not Available | Negative | 1338858 - 1339550 | 26511.3 |
| aldo/keto reductase | SAMN05216474_1241 | Not Available | Negative | 1339668 - 1340468 | 30681.8 |
| hypothetical protein | SAMN05216474_1242 | Not Available | Negative | 1340458 - 1341033 | 22466.0 |
| transglutaminase-like superfamily protein | SAMN05216474_1243 | Not Available | Positive | 1341183 - 1341839 | 25291.6 |
| hypothetical protein | SAMN05216474_1244 | Not Available | Negative | 1341836 - 1342321 | 18494.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
