Yangia pacifica strain DSM 26894

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Alloyangia

Description

Yangia pacifica strain DSM 26894 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain thrives at an optimal growth temperature of 37°C, indicating its classification as mesophilic, which means it prefers moderate temperature conditions. Yangia pacifica is non-spore-forming and possesses a single replicon, which is essential for its replication and cellular functions. The aerobic nature of Yangia pacifica suggests that it requires oxygen for its metabolic processes, which is typical for many bacteria that are involved in the degradation of organic matter in their environments. Its optimal growth temperature aligns with that of many mesophilic organisms, indicating that it may inhabit environments that experience mild temperatures, such as coastal regions or marine ecosystems. The strain is cataloged under the accession number FOZW00000000.1, which provides a reference for genetic and genomic studies. Understanding the characteristics of Yangia pacifica, including its non-spore-forming nature and reliance on aerobic conditions, can provide insights into its ecological role. This bacterium may contribute to nutrient cycling in marine environments, where the breakdown of organic material is essential for maintaining ecosystem health. Its adaptation to mesophilic conditions further emphasizes its potential significance in coastal habitats, where temperature fluctuations are less extreme compared to other environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusAlloyangia
SpeciesAlloyangia pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yangia pacifica strain DSM 26894 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxy-tetrahydrodipicolinate synthaseSAMN04488050_10226Not AvailableNegative938372 - 93933134457.5
hypothetical proteinSAMN04488050_10227Not AvailableNegative939382 - 93978613986.6
transcriptional regulator, xre family with cupin sensorSAMN04488050_10228Not AvailablePositive939943 - 94057823740.1
malate/lactate/ureidoglycolate dehydrogenase, ldh2 familySAMN04488050_10229Not AvailablePositive940634 - 94167136300.5
chloride channel protein, cic familySAMN04488050_10230Not AvailableNegative941724 - 94347262203.9
amino-transferase class ivSAMN04488050_10231Not AvailableNegative943488 - 94377510691.8
polar amino acid transport system substrate-binding proteinSAMN04488050_10232Not AvailableNegative944717 - 94553829637.3
hypothetical proteinSAMN04488050_10233Not AvailableNegative945535 - 9457658427.12
atpase, p-type (transporting), had superfamily, subfamily icSAMN04488050_10234Not AvailablePositive946247 - 94897096096.6
uncharacterized membrane protein, duf4010 familySAMN04488050_10235Not AvailableNegative948967 - 95025643214.0

Displaying genes 961 – 970 of 5788 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.