Yangia pacifica strain DSM 26894

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Alloyangia

Description

Yangia pacifica strain DSM 26894 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain thrives at an optimal growth temperature of 37°C, indicating its classification as mesophilic, which means it prefers moderate temperature conditions. Yangia pacifica is non-spore-forming and possesses a single replicon, which is essential for its replication and cellular functions. The aerobic nature of Yangia pacifica suggests that it requires oxygen for its metabolic processes, which is typical for many bacteria that are involved in the degradation of organic matter in their environments. Its optimal growth temperature aligns with that of many mesophilic organisms, indicating that it may inhabit environments that experience mild temperatures, such as coastal regions or marine ecosystems. The strain is cataloged under the accession number FOZW00000000.1, which provides a reference for genetic and genomic studies. Understanding the characteristics of Yangia pacifica, including its non-spore-forming nature and reliance on aerobic conditions, can provide insights into its ecological role. This bacterium may contribute to nutrient cycling in marine environments, where the breakdown of organic material is essential for maintaining ecosystem health. Its adaptation to mesophilic conditions further emphasizes its potential significance in coastal habitats, where temperature fluctuations are less extreme compared to other environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusAlloyangia
SpeciesAlloyangia pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yangia pacifica strain DSM 26894 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative spermidine/putrescine transport system substrate-binding proteinSAMN04488050_102546Not AvailableNegative1462821 - 146412848723.7
asp-trnaasn/glu-trnagln amidotransferase a subunitSAMN04488050_102547Not AvailablePositive1464365 - 146567845983.9
outer membrane receptor for ferrienterochelin and colicinsSAMN04488050_102548Not AvailablePositive1466209 - 146850383219.8
ribonucleoside-diphosphate reductase class ib beta subunitSAMN04488050_102549Not AvailableNegative1468653 - 146962736764.1
ribonucleoside-diphosphate reductase class ib alpha subunitSAMN04488050_102550Not AvailableNegative1469746 - 147186979650.9
protein involved in ribonucleotide reductionSAMN04488050_102551Not AvailableNegative1471854 - 147226714563.5
ribonucleoside-diphosphate reductase class ib glutaredoxin subunitSAMN04488050_102552Not AvailableNegative1472299 - 14725208007.49
l-asparaginaseSAMN04488050_102554Not AvailablePositive1473259 - 147425134191.1
phod-like phosphataseSAMN04488050_102555Not AvailablePositive1474353 - 147575952170.3
catalase-peroxidaseSAMN04488050_102556Not AvailablePositive1475984 - 147815879531.6

Displaying genes 1441 – 1450 of 5788 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.