Yangia pacifica strain DSM 26894

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Alloyangia

Description

Yangia pacifica strain DSM 26894 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain thrives at an optimal growth temperature of 37°C, indicating its classification as mesophilic, which means it prefers moderate temperature conditions. Yangia pacifica is non-spore-forming and possesses a single replicon, which is essential for its replication and cellular functions. The aerobic nature of Yangia pacifica suggests that it requires oxygen for its metabolic processes, which is typical for many bacteria that are involved in the degradation of organic matter in their environments. Its optimal growth temperature aligns with that of many mesophilic organisms, indicating that it may inhabit environments that experience mild temperatures, such as coastal regions or marine ecosystems. The strain is cataloged under the accession number FOZW00000000.1, which provides a reference for genetic and genomic studies. Understanding the characteristics of Yangia pacifica, including its non-spore-forming nature and reliance on aerobic conditions, can provide insights into its ecological role. This bacterium may contribute to nutrient cycling in marine environments, where the breakdown of organic material is essential for maintaining ecosystem health. Its adaptation to mesophilic conditions further emphasizes its potential significance in coastal habitats, where temperature fluctuations are less extreme compared to other environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusAlloyangia
SpeciesAlloyangia pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yangia pacifica strain DSM 26894 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunitSAMN04488050_10276Not AvailablePositive991560 - 99272941073.3
hypothetical proteinSAMN04488050_10277Not AvailableNegative992652 - 99322420972.2
flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase ssud and methylene tetrahydromethanopterin reductase)SAMN04488050_10278Not AvailablePositive993741 - 99476037664.4
sn-glycerol 3-phosphate transport system substrate-binding proteinSAMN04488050_10279Not AvailablePositive994906 - 99620147501.5
sn-glycerol 3-phosphate transport system permease proteinSAMN04488050_10280Not AvailablePositive996303 - 99727436024.1
sn-glycerol 3-phosphate transport system permease proteinSAMN04488050_10281Not AvailablePositive997279 - 99812131141.2
sn-glycerol 3-phosphate transport system atp-binding proteinSAMN04488050_10282Not AvailablePositive998121 - 99919138692.9
metal-dependent hydrolase, endonuclease/exonuclease/phosphatase familySAMN04488050_10283Not AvailablePositive999188 - 100017435424.3
hypothetical proteinSAMN04488050_10284Not AvailablePositive1000496 - 100111621548.7
hypothetical proteinSAMN04488050_10285Not AvailablePositive1001142 - 100195729245.8

Displaying genes 1011 – 1020 of 5788 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.