Dyella sp. OK004

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella sp. OK004 is a Gram-negative bacterium characterized by its rod-shaped morphology. This organism is notable for having a single replicon, which is indicative of its genomic structure. The genomic sequence of Dyella sp. OK004 is accessible under the accession number FOZI00000000.1, providing a foundational reference for further studies and comparisons. As a member of the Dyella genus, this bacterium is likely to inhabit specific environmental niches, although the precise ecological roles are not outlined in the provided data. Generally, members of the Dyella genus are known to be involved in various biogeochemical processes, which can include the degradation of organic compounds and contributions to nutrient cycling. Understanding the characteristics of Dyella sp. OK004, particularly its Gram-negative nature and rod shape, is crucial for identifying its potential interactions within microbial communities. Such traits may influence its metabolic capabilities and resilience in diverse environments. This knowledge can aid in exploring the ecological significance of Dyella sp. OK004, particularly in relation to its potential applications in biotechnology or environmental remediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella sp. OK004
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella sp. OK004 genome assembly, contig: Ga0066746_18, whole

Gene Summary

Adenine Count

926870 bp

Thymine Count

906812 bp

Guanine Count

1543042 bp

Cytosine Count

1583757 bp

Genome Length

4960986 bp

Protein-coding Genes

4199 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heavy metal efflux pump, czca familySAMN05216570_0686Not AvailableNegative772481 - 775687113917.0
signal transduction histidine kinaseSAMN05216570_0687Not AvailableNegative775875 - 77728751161.9
dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domainSAMN05216570_0688Not AvailableNegative777284 - 77798525953.3
rna polymerase sigma-32 factorSAMN05216570_0689Not AvailableNegative778067 - 77892432044.3
hypothetical proteinSAMN05216570_0690Not AvailableNegative779083 - 77992231669.0
uracil-dna glycosylaseSAMN05216570_0691Not AvailableNegative780143 - 78086526429.5
response regulator receiver domain-containing proteinSAMN05216570_0692Not AvailableNegative780862 - 78170430787.2
cell division transport system permease proteinSAMN05216570_0693Not AvailableNegative781842 - 78283135363.5
cell division transport system atp-binding proteinSAMN05216570_0694Not AvailableNegative782828 - 78350524524.4
atp-dependent rna helicase rhlbSAMN05216570_0695Not AvailableNegative783609 - 78532163315.6

Displaying genes 691 – 700 of 4257 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.