[Clostridium] aminophilum strain F

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Lachnoclostridium

Description

Clostridium aminophilum strain F is a Gram-positive, rod-shaped bacterium characterized by the presence of flagella, which facilitates motility. This strain is predominantly found in the rumen and rumen fluid of its hosts, which include Bos (cattle) and Ovis aries (sheep). The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and survival in the complex microbial ecosystem of the rumen. The presence of this strain in the rumen suggests its potential role in the digestion of fibrous plant materials, as well as its contribution to the overall fermentation process, which is critical for the nutritional efficiency of ruminants. The accession number FOZC00000000.1 provides a reference for genomic data related to this strain, allowing for further studies into its metabolic capabilities and interactions within the rumen microbiome. Understanding the ecological role of Clostridium aminophilum strain F can provide insights into the dynamics of microbial communities in the rumen and their impact on host health and nutrition. This highlights the importance of such microorganisms in the digestive processes of herbivorous animals and their potential influence on agricultural practices.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusLachnoclostridium
Species[Clostridium] aminophilum
Strainstrain F

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of [Clostridium] aminophilum strain F
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen; rumen fluid
Biotic relationshipNot Available
Host(s)Bos, Ovis aries
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Clostridium] aminophilum strain F genome assembly, contig:

Gene Summary

Adenine Count

766007 bp

Thymine Count

767109 bp

Guanine Count

790801 bp

Cytosine Count

789393 bp

Genome Length

3113820 bp

Protein-coding Genes

2572 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
regulatory proteinSAMN02910262_02637Not AvailablePositive3066041 - 306664924043.7
ribonucrease ySAMN02910262_02638Not AvailablePositive3066745 - 306829258091.8
pyrroline-5-carboxylate reductaseSAMN02910262_02639Not AvailablePositive3068553 - 306935928696.8
adp-ribose pyrophosphataseSAMN02910262_02640Not AvailablePositive3069392 - 306996421796.9
coa-substrate-specific enzyme activase, putativeSAMN02910262_02641Not AvailableNegative3070222 - 3074508158461.0
membrane associated serine protease, rhomboid familySAMN02910262_02642Not AvailablePositive3074933 - 307581734174.1
diaminopimelate decarboxylaseSAMN02910262_02643Not AvailablePositive3076009 - 307730148841.4
k(+)-stimulated pyrophosphate-energized sodium pumpSAMN02910262_02644Not AvailablePositive3077915 - 307989767540.0
site-specific dna recombinaseSAMN02910262_02646Not AvailableNegative3081352 - 308304364716.2
hypothetical proteinSAMN02910262_02647Not AvailableNegative3083121 - 30832795967.35

Displaying genes 2601 – 2610 of 2637 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.