[Clostridium] aminophilum strain F

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Lachnoclostridium

Description

Clostridium aminophilum strain F is a Gram-positive, rod-shaped bacterium characterized by the presence of flagella, which facilitates motility. This strain is predominantly found in the rumen and rumen fluid of its hosts, which include Bos (cattle) and Ovis aries (sheep). The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and survival in the complex microbial ecosystem of the rumen. The presence of this strain in the rumen suggests its potential role in the digestion of fibrous plant materials, as well as its contribution to the overall fermentation process, which is critical for the nutritional efficiency of ruminants. The accession number FOZC00000000.1 provides a reference for genomic data related to this strain, allowing for further studies into its metabolic capabilities and interactions within the rumen microbiome. Understanding the ecological role of Clostridium aminophilum strain F can provide insights into the dynamics of microbial communities in the rumen and their impact on host health and nutrition. This highlights the importance of such microorganisms in the digestive processes of herbivorous animals and their potential influence on agricultural practices.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusLachnoclostridium
Species[Clostridium] aminophilum
Strainstrain F

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of [Clostridium] aminophilum strain F
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen; rumen fluid
Biotic relationshipNot Available
Host(s)Bos, Ovis aries
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Clostridium] aminophilum strain F genome assembly, contig:

Gene Summary

Adenine Count

766007 bp

Thymine Count

767109 bp

Guanine Count

790801 bp

Cytosine Count

789393 bp

Genome Length

3113820 bp

Protein-coding Genes

2572 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
6-phosphogluconolactonaseSAMN02910262_02584Not AvailableNegative3005562 - 300662339456.8
spermidine/putrescine transport system atp-binding proteinSAMN02910262_02585Not AvailablePositive3006885 - 300798240802.1
spermidine/putrescine transport system permease proteinSAMN02910262_02586Not AvailablePositive3007998 - 300881629815.7
spermidine/putrescine transport system permease proteinSAMN02910262_02587Not AvailablePositive3008816 - 301075673346.8
predicted fe-mo cluster-binding protein, nifx familySAMN02910262_02588Not AvailablePositive3010792 - 301122314779.5
eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant)SAMN02910262_02589Not AvailableNegative3011376 - 301307665575.3
trna (cytidine/uridine-2'-o-)-methyltransferaseSAMN02910262_02590Not AvailableNegative3013161 - 301365818944.7
aminotransferaseSAMN02910262_02591Not AvailableNegative3013651 - 301482644278.6
dna-binding transcriptional regulator, lrp familySAMN02910262_02592Not AvailableNegative3014823 - 301530517901.5
air synthase related protein, c-terminal domainSAMN02910262_02593Not AvailableNegative3015339 - 301596822743.1

Displaying genes 2551 – 2560 of 2637 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.