[Clostridium] aminophilum strain F

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Lachnoclostridium

Description

Clostridium aminophilum strain F is a Gram-positive, rod-shaped bacterium characterized by the presence of flagella, which facilitates motility. This strain is predominantly found in the rumen and rumen fluid of its hosts, which include Bos (cattle) and Ovis aries (sheep). The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and survival in the complex microbial ecosystem of the rumen. The presence of this strain in the rumen suggests its potential role in the digestion of fibrous plant materials, as well as its contribution to the overall fermentation process, which is critical for the nutritional efficiency of ruminants. The accession number FOZC00000000.1 provides a reference for genomic data related to this strain, allowing for further studies into its metabolic capabilities and interactions within the rumen microbiome. Understanding the ecological role of Clostridium aminophilum strain F can provide insights into the dynamics of microbial communities in the rumen and their impact on host health and nutrition. This highlights the importance of such microorganisms in the digestive processes of herbivorous animals and their potential influence on agricultural practices.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusLachnoclostridium
Species[Clostridium] aminophilum
Strainstrain F

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of [Clostridium] aminophilum strain F
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen; rumen fluid
Biotic relationshipNot Available
Host(s)Bos, Ovis aries
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

[Clostridium] aminophilum strain F genome assembly, contig:

Gene Summary

Adenine Count

766007 bp

Thymine Count

767109 bp

Guanine Count

790801 bp

Cytosine Count

789393 bp

Genome Length

3113820 bp

Protein-coding Genes

2572 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiamine biosynthesis lipoproteinSAMN02910262_02461Not AvailablePositive2863370 - 286449441517.8
hypothetical proteinSAMN02910262_02462Not AvailablePositive2864491 - 286484713085.0
arginase family proteinSAMN02910262_02463Not AvailableNegative2864900 - 286574531981.0
dna-binding transcriptional regulator, lysr familySAMN02910262_02464Not AvailableNegative2865762 - 286663732749.2
threonine/homoserine efflux transporter rhtaSAMN02910262_02465Not AvailablePositive2866846 - 286774232035.4
uncharacterized protein ycsi, upf0317 familySAMN02910262_02466Not AvailableNegative2867967 - 286877929800.7
biotin-dependent carboxylase uncharacterized domain-containing proteinSAMN02910262_02467Not AvailableNegative2868793 - 286996242019.6
sensor histidine kinase inhibitor, kipi familySAMN02910262_02468Not AvailableNegative2869962 - 287069327114.3
mn2+ and fe2+ transporters of the nramp familySAMN02910262_02469Not AvailableNegative2870775 - 287196841194.9
upf0271 proteinSAMN02910262_02470Not AvailableNegative2872057 - 287281527329.9

Displaying genes 2431 – 2440 of 2637 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.