Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487947_0010 | Not Available | Positive | 12056 - 12463 | 14015.7 |
| amphi-trp domain-containing protein | SAMN04487947_0011 | Not Available | Positive | 12550 - 12807 | 9278.98 |
| sarcosine oxidase subunit beta | SAMN04487947_0012 | Not Available | Negative | 12844 - 13992 | 40370.7 |
| alanine dehydrogenase | SAMN04487947_0013 | Not Available | Positive | 14105 - 15073 | 33673.3 |
| tryptophanyl-trna synthetase | SAMN04487947_0014 | Not Available | Negative | 15080 - 16696 | 59889.7 |
| pp_00015 | SAMN04487947_0015 | Not Available | Negative | 16693 - 17742 | Not Available |
| hypothetical protein | SAMN04487947_0016 | Not Available | Positive | 17851 - 18096 | 9452.84 |
| dna topoisomerase-1 | SAMN04487947_0017 | Not Available | Negative | 18178 - 18918 | 26075.6 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN04487947_0018 | Not Available | Positive | 18994 - 19644 | 23793.3 |
| replicative superfamily ii helicase | SAMN04487947_0019 | Not Available | Negative | 19786 - 22137 | 86562.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
