Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantoate kinase | SAMN04487947_0911 | Not Available | Negative | 848160 - 849080 | 30830.6 |
| hypothetical protein | SAMN04487947_0912 | Not Available | Negative | 849188 - 849529 | 13123.8 |
| hypothetical protein | SAMN04487947_0913 | Not Available | Negative | 849638 - 850228 | 20821.7 |
| uncharacterised protein family (upf0175) | SAMN04487947_0914 | Not Available | Positive | 850325 - 850627 | 11206.2 |
| predicted nucleic acid-binding protein, contains pin domain | SAMN04487947_0915 | Not Available | Positive | 850628 - 851152 | 18621.9 |
| aspartyl-trna synthetase | SAMN04487947_0916 | Not Available | Negative | 851495 - 852799 | 48783.2 |
| protein of unknown function | SAMN04487947_0917 | Not Available | Positive | 852966 - 853697 | 24664.8 |
| phosphoglycerol geranylgeranyltransferase | SAMN04487947_0918 | Not Available | Negative | 853861 - 854583 | 26436.3 |
| dna topoisomerase-1 | SAMN04487947_0919 | Not Available | Negative | 854862 - 857471 | 96905.9 |
| putative efflux protein, mate family | SAMN04487947_0920 | Not Available | Positive | 857760 - 859193 | 49568.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
