Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | SAMN04487947_0801 | Not Available | Positive | 752752 - 753501 | 26595.6 |
| lipoate-protein ligase a | SAMN04487947_0802 | Not Available | Positive | 753539 - 754366 | 30460.0 |
| peroxiredoxin q/bcp | SAMN04487947_0803 | Not Available | Negative | 754363 - 754893 | 19891.3 |
| endonuclease iv | SAMN04487947_0804 | Not Available | Positive | 755017 - 755892 | 31736.6 |
| endonuclease/exonuclease/phosphatase family protein | SAMN04487947_0805 | Not Available | Positive | 755984 - 757528 | 50677.4 |
| methyltransferase domain-containing protein | SAMN04487947_0806 | Not Available | Positive | 757574 - 758377 | 29591.6 |
| predicted nucleic-acid-binding protein, contains zn-ribbon domain | SAMN04487947_0807 | Not Available | Negative | 758411 - 758626 | 7712.91 |
| hypothetical protein | SAMN04487947_0808 | Not Available | Positive | 758753 - 758917 | 6064.25 |
| hypothetical protein | SAMN04487947_0809 | Not Available | Negative | 758945 - 759589 | 23459.6 |
| tigr00269 family protein | SAMN04487947_0810 | Not Available | Positive | 759693 - 760661 | 36312.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
