Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel | SAMN04487947_0547 | Not Available | Positive | 516389 - 517384 | 35529.1 |
| ssu ribosomal protein s12p | SAMN04487947_0548 | Not Available | Positive | 517564 - 517992 | 15590.9 |
| small subunit ribosomal protein s7 | SAMN04487947_0549 | Not Available | Positive | 517992 - 518606 | 22593.3 |
| hypothetical protein | SAMN04487947_0550 | Not Available | Negative | 518735 - 519505 | 28397.9 |
| translation elongation factor 2 (ef-2/ef-g) | SAMN04487947_0551 | Not Available | Positive | 519705 - 521894 | 80589.5 |
| signal transduction histidine kinase | SAMN04487947_0552 | Not Available | Positive | 522033 - 523208 | 40081.3 |
| act domain-containing protein | SAMN04487947_0553 | Not Available | Positive | 523476 - 524030 | 19731.1 |
| homoserine dehydrogenase | SAMN04487947_0554 | Not Available | Positive | 524027 - 524983 | 32311.4 |
| translation elongation factor 1a (ef-1a/ef-tu) | SAMN04487947_0555 | Not Available | Positive | 525172 - 526437 | 45880.5 |
| ssu ribosomal protein s10p | SAMN04487947_0556 | Not Available | Positive | 526438 - 526746 | 11456.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
