Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent amino-or carboxypeptidase, m28 family | SAMN04487947_4177 | Not Available | Negative | 4100310 - 4101686 | 49396.4 |
| peptide/nickel transport system substrate-binding protein | SAMN04487947_4178 | Not Available | Positive | 4101887 - 4103611 | 64505.7 |
| peptide/nickel transport system permease protein | SAMN04487947_4179 | Not Available | Positive | 4103685 - 4104662 | 35674.1 |
| peptide/nickel transport system permease protein | SAMN04487947_4180 | Not Available | Positive | 4104667 - 4105647 | 35672.5 |
| peptide/nickel transport system atp-binding protein | SAMN04487947_4181 | Not Available | Positive | 4105644 - 4106681 | 38479.5 |
| peptide/nickel transport system atp-binding protein | SAMN04487947_4182 | Not Available | Positive | 4106683 - 4107780 | 40096.0 |
| tldd protein | SAMN04487947_4183 | Not Available | Negative | 4107785 - 4109245 | 52937.7 |
| hypothetical protein | SAMN04487947_4184 | Not Available | Negative | 4109369 - 4110421 | 37816.9 |
| hypothetical protein | SAMN04487947_4185 | Not Available | Negative | 4110590 - 4110838 | 9023.85 |
| methyltransferase domain-containing protein | SAMN04487947_4186 | Not Available | Positive | 4111211 - 4111828 | 23124.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
