Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pgf-cterm protein | SAMN04487947_4134 | Not Available | Negative | 4055752 - 4058052 | 80049.8 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN04487947_4135 | Not Available | Negative | 4058333 - 4060834 | 91402.9 |
| hypothetical protein | SAMN04487947_4136 | Not Available | Negative | 4060959 - 4061897 | 33344.9 |
| protein of unknown function duf2617 | SAMN04487947_4137 | Not Available | Negative | 4061894 - 4062433 | 18929.5 |
| spermidine synthase | SAMN04487947_4138 | Not Available | Negative | 4062436 - 4064211 | 65941.6 |
| hypothetical protein | SAMN04487947_4139 | Not Available | Negative | 4064281 - 4064991 | 24812.1 |
| hypothetical protein | SAMN04487947_4140 | Not Available | Negative | 4065133 - 4065627 | 16843.6 |
| hypothetical protein | SAMN04487947_4141 | Not Available | Positive | 4065827 - 4066408 | 21964.7 |
| helix-turn-helix domain-containing protein | SAMN04487947_4142 | Not Available | Positive | 4066652 - 4066975 | 12068.2 |
| hypothetical protein | SAMN04487947_4143 | Not Available | Negative | 4067048 - 4067437 | 13900.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
