Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catechol 2,3-dioxygenase | SAMN04487947_0030 | Not Available | Positive | 33599 - 34033 | 16292.6 |
| phosphoserine phosphatase | SAMN04487947_0032 | Not Available | Negative | 35172 - 35822 | 22966.2 |
| d-3-phosphoglycerate dehydrogenase | SAMN04487947_0033 | Not Available | Positive | 35979 - 37571 | 56189.8 |
| hypothetical protein | SAMN04487947_0034 | Not Available | Negative | 37623 - 38165 | 19874.6 |
| threonine synthase | SAMN04487947_0035 | Not Available | Negative | 38250 - 39515 | 44933.7 |
| outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeat | SAMN04487947_0036 | Not Available | Positive | 39616 - 40803 | 41584.4 |
| predicted transcriptional regulator | SAMN04487947_0037 | Not Available | Negative | 40870 - 41241 | 13755.9 |
| hypothetical protein | SAMN04487947_0038 | Not Available | Negative | 41394 - 41633 | 8911.59 |
| hypothetical protein | SAMN04487947_0039 | Not Available | Negative | 41727 - 42389 | 21380.3 |
| hypothetical protein | SAMN04487947_0040 | Not Available | Negative | 42781 - 43467 | 25476.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
