Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase | SAMN04487947_3984 | Not Available | Positive | 3870240 - 3870785 | 20372.5 |
| udp-glucose 4-epimerase | SAMN04487947_3985 | Not Available | Negative | 3870782 - 3871708 | 32845.7 |
| predicted dehydrogenase | SAMN04487947_3986 | Not Available | Positive | 3871886 - 3873034 | 41519.0 |
| carbohydrate binding module (family 6) | SAMN04487947_3987 | Not Available | Positive | 3873190 - 3874683 | 51811.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487947_3988 | Not Available | Negative | 3874723 - 3875685 | 35602.7 |
| right handed beta helix region | SAMN04487947_3989 | Not Available | Positive | 3876145 - 3877515 | 47569.3 |
| pectate lyase superfamily protein | SAMN04487947_3990 | Not Available | Positive | 3877795 - 3879129 | 47155.3 |
| hypothetical protein | SAMN04487947_3991 | Not Available | Negative | 3879184 - 3880098 | 34987.1 |
| hypothetical protein | SAMN04487947_3992 | Not Available | Positive | 3880536 - 3881528 | 37923.2 |
| uncharacterized sulfatase | SAMN04487947_3993 | Not Available | Negative | 3881650 - 3883125 | 54604.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
