Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487947_3964 | Not Available | Negative | 3849387 - 3850149 | 25356.2 |
| matrix metalloproteinase-14 (membrane-inserted) | SAMN04487947_3965 | Not Available | Positive | 3850994 - 3851359 | 12852.1 |
| hypothetical protein | SAMN04487947_3966 | Not Available | Negative | 3851504 - 3852349 | 30697.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04487947_3967 | Not Available | Negative | 3852731 - 3853501 | 26585.8 |
| uncharacterized acr, cog1753 | SAMN04487947_3968 | Not Available | Positive | 3853654 - 3853899 | 9434.99 |
| hypothetical protein | SAMN04487947_3969 | Not Available | Positive | 3853896 - 3854288 | 14634.6 |
| acyl-coa dehydrogenase | SAMN04487947_3970 | Not Available | Negative | 3854290 - 3855504 | 44462.1 |
| predicted kinase, aminoglycoside phosphotransferase (apt) family | SAMN04487947_3971 | Not Available | Positive | 3855580 - 3856644 | 40569.4 |
| hypothetical protein | SAMN04487947_3972 | Not Available | Negative | 3856721 - 3857692 | 34083.8 |
| abc-2 type transport system atp-binding protein | SAMN04487947_3973 | Not Available | Positive | 3857694 - 3858509 | 28331.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
