Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron(iii) transport system atp-binding protein | SAMN04487947_3922 | Not Available | Positive | 3798876 - 3800039 | 42538.1 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN04487947_3923 | Not Available | Positive | 3800046 - 3802247 | 78104.7 |
| hypothetical protein | SAMN04487947_3924 | Not Available | Negative | 3802248 - 3802496 | 9457.2 |
| hypothetical glycoside hydrolase 5 | SAMN04487947_3925 | Not Available | Negative | 3802758 - 3805175 | 90889.5 |
| glucan 1,4-alpha-glucosidase | SAMN04487947_3927 | Not Available | Positive | 3807410 - 3811939 | 166908.0 |
| ligand-binding srpbcc domain-containing protein | SAMN04487947_3928 | Not Available | Positive | 3812011 - 3812505 | 18441.8 |
| pas domain s-box-containing protein | SAMN04487947_3929 | Not Available | Negative | 3812594 - 3814546 | 71343.5 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04487947_3930 | Not Available | Negative | 3814655 - 3815659 | 34076.8 |
| predicted arabinose efflux permease, mfs family | SAMN04487947_3931 | Not Available | Negative | 3815795 - 3817033 | 44683.6 |
| preq(0) biosynthesis protein quec | SAMN04487947_3932 | Not Available | Negative | 3817248 - 3817964 | 26612.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
