Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactate permease | SAMN04487947_3912 | Not Available | Positive | 3784377 - 3786137 | 61013.0 |
| fad/fmn-containing dehydrogenase | SAMN04487947_3913 | Not Available | Positive | 3786284 - 3789418 | 113070.0 |
| aspartate/methionine/tyrosine aminotransferase | SAMN04487947_3914 | Not Available | Negative | 3789468 - 3790583 | 39313.6 |
| uri superfamily endonuclease | SAMN04487947_3915 | Not Available | Negative | 3790850 - 3791353 | 17222.1 |
| protein of unknown function, duf393 | SAMN04487947_3916 | Not Available | Negative | 3791354 - 3791782 | 15599.0 |
| dead/deah box helicase domain-containing protein | SAMN04487947_3917 | Not Available | Positive | 3791882 - 3794260 | 87751.1 |
| hpp family protein | SAMN04487947_3918 | Not Available | Negative | 3794221 - 3794712 | 16321.3 |
| reversibly glycosylated polypeptide | SAMN04487947_3919 | Not Available | Positive | 3794815 - 3795984 | 44085.5 |
| iron(iii) transport system substrate-binding protein | SAMN04487947_3920 | Not Available | Positive | 3796061 - 3797263 | 42917.8 |
| iron(iii) transport system permease protein | SAMN04487947_3921 | Not Available | Positive | 3797279 - 3798886 | 57318.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
