Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine protease, s1-c subfamily, contains c-terminal pdz domain | SAMN04487947_0373 | Not Available | Negative | 352006 - 353259 | 42345.6 |
| sugar phosphate permease | SAMN04487947_0374 | Not Available | Negative | 353341 - 354537 | 40936.4 |
| acetolactate synthase-1/2/3 large subunit | SAMN04487947_0375 | Not Available | Negative | 354711 - 356291 | 56429.5 |
| histidine triad (hit) family protein | SAMN04487947_0376 | Not Available | Negative | 356417 - 356833 | 14643.0 |
| histidine triad (hit) family protein | SAMN04487947_0377 | Not Available | Negative | 356894 - 357316 | 14727.0 |
| inorganic phosphate transporter, pit family | SAMN04487947_0378 | Not Available | Positive | 357434 - 358684 | 42670.5 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN04487947_0380 | Not Available | Positive | 359423 - 362353 | 112880.0 |
| dna (cytosine-5)-methyltransferase 1 | SAMN04487947_0381 | Not Available | Negative | 362366 - 363532 | 43629.9 |
| hypothetical protein | SAMN04487947_0383 | Not Available | Positive | 364109 - 364414 | 11193.8 |
| hypothetical protein | SAMN04487947_0384 | Not Available | Negative | 364416 - 364640 | 7796.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
