Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487947_3608 | Not Available | Positive | 3471962 - 3472183 | 8295.43 |
| hypothetical protein | SAMN04487947_3609 | Not Available | Positive | 3472176 - 3472580 | 14388.3 |
| hypothetical protein | SAMN04487947_3610 | Not Available | Positive | 3472627 - 3472917 | 11172.8 |
| catechol 2,3-dioxygenase | SAMN04487947_3611 | Not Available | Negative | 3473374 - 3473991 | 22880.0 |
| lysylphosphatidylglycerol synthase tm region | SAMN04487947_3612 | Not Available | Positive | 3474119 - 3475132 | 33853.8 |
| fad binding domain-containing protein | SAMN04487947_3613 | Not Available | Positive | 3475256 - 3475837 | 20163.9 |
| pas domain s-box-containing protein | SAMN04487947_3614 | Not Available | Negative | 3475865 - 3476911 | 38560.7 |
| thiosulfate dehydrogenase | SAMN04487947_3615 | Not Available | Negative | 3477081 - 3477635 | 19947.3 |
| winged helix-turn-helix dna-binding | SAMN04487947_3616 | Not Available | Positive | 3478150 - 3478392 | 9245.88 |
| glycogen debranching enzyme (alpha-1,6-glucosidase) | SAMN04487947_3617 | Not Available | Negative | 3478507 - 3480591 | 75111.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
