Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system substrate-binding protein | SAMN04487947_3557 | Not Available | Positive | 3423851 - 3425548 | 60985.2 |
| peptide/nickel transport system atp-binding protein | SAMN04487947_3558 | Not Available | Negative | 3425729 - 3427825 | 76788.3 |
| peptide/nickel transport system permease protein | SAMN04487947_3559 | Not Available | Negative | 3427999 - 3428889 | 31626.8 |
| peptide/nickel transport system permease protein | SAMN04487947_3560 | Not Available | Negative | 3428892 - 3429854 | 35204.5 |
| sarcosine oxidase | SAMN04487947_3561 | Not Available | Negative | 3429991 - 3431124 | 41562.9 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04487947_3562 | Not Available | Positive | 3431269 - 3432066 | 28318.1 |
| snoal-like polyketide cyclase | SAMN04487947_3563 | Not Available | Positive | 3432608 - 3433069 | 17524.5 |
| hypothetical protein | SAMN04487947_3564 | Not Available | Positive | 3433397 - 3433762 | 13094.8 |
| glycerol 2-dehydrogenase (nad+) | SAMN04487947_3565 | Not Available | Positive | 3433862 - 3434962 | 38318.9 |
| hypothetical protein | SAMN04487947_3566 | Not Available | Positive | 3435305 - 3435817 | 19567.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
