Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487947_3507 | Not Available | Positive | 3357086 - 3357259 | 6609.52 |
| abc-type transport system involved in multi-copper enzyme maturation, permease component | SAMN04487947_3508 | Not Available | Negative | 3357358 - 3358929 | 54961.1 |
| abc-2 type transport system atp-binding protein | SAMN04487947_3509 | Not Available | Negative | 3358926 - 3359789 | 31446.3 |
| transcriptional regulator, iclr family | SAMN04487947_3510 | Not Available | Negative | 3361067 - 3361831 | 28525.3 |
| 3-keto-5-aminohexanoate cleavage enzyme | SAMN04487947_3511 | Not Available | Negative | 3362367 - 3363221 | 31603.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04487947_3512 | Not Available | Positive | 3363432 - 3364208 | 27731.7 |
| substrate-binding protein domain-containing protein | SAMN04487947_3513 | Not Available | Positive | 3364563 - 3365723 | 42325.2 |
| ribose transport system atp-binding protein | SAMN04487947_3514 | Not Available | Positive | 3365746 - 3367320 | 57179.5 |
| ribose transport system permease protein | SAMN04487947_3515 | Not Available | Positive | 3367323 - 3368324 | 35340.0 |
| catechol 2,3-dioxygenase | SAMN04487947_3516 | Not Available | Negative | 3368440 - 3368934 | 18353.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
