Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein yurz, alkylhydroperoxidase/carboxymuconolactone decarboxylase family | SAMN04487947_3353 | Not Available | Positive | 3187885 - 3188214 | 11766.9 |
| pas domain s-box-containing protein | SAMN04487947_3354 | Not Available | Negative | 3188612 - 3191350 | 100088.0 |
| hypothetical protein | SAMN04487947_3355 | Not Available | Positive | 3191582 - 3191887 | 11024.8 |
| hypothetical protein | SAMN04487947_3356 | Not Available | Negative | 3191999 - 3192409 | 15185.0 |
| cellulose biosynthesis protein bcsq | SAMN04487947_3357 | Not Available | Negative | 3192406 - 3193293 | 32670.8 |
| hypothetical protein | SAMN04487947_3358 | Not Available | Negative | 3193896 - 3194204 | 11617.4 |
| pas domain s-box-containing protein | SAMN04487947_3359 | Not Available | Positive | 3194433 - 3197789 | 125181.0 |
| hypothetical protein | SAMN04487947_3361 | Not Available | Positive | 3198773 - 3199123 | 12403.5 |
| thiamine biosynthesis lipoprotein | SAMN04487947_3362 | Not Available | Positive | 3199129 - 3199998 | 31098.9 |
| hypothetical protein | SAMN04487947_3363 | Not Available | Positive | 3200269 - 3200811 | 19281.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
