Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orc complex protein cdc6/orc1 | SAMN04487947_3303 | Not Available | Negative | 3132868 - 3134064 | 44986.2 |
| transcriptional regulator, iclr family | SAMN04487947_3304 | Not Available | Negative | 3134978 - 3135751 | 28771.6 |
| choline/carnitine/betaine transport | SAMN04487947_3305 | Not Available | Negative | 3136716 - 3138350 | 57647.3 |
| hypothetical protein | SAMN04487947_3306 | Not Available | Positive | 3138709 - 3139362 | 24928.1 |
| reactive intermediate/imine deaminase | SAMN04487947_3307 | Not Available | Positive | 3139639 - 3140025 | 13580.7 |
| diaminobutyrate-2-oxoglutarate transaminase | SAMN04487947_3308 | Not Available | Negative | 3140126 - 3141505 | 49358.7 |
| aldehyde:ferredoxin oxidoreductase | SAMN04487947_3309 | Not Available | Positive | 3141638 - 3143299 | 59756.3 |
| xaa-pro aminopeptidase | SAMN04487947_3310 | Not Available | Positive | 3143466 - 3144644 | 44185.2 |
| glutamate dehydrogenase (nad(p)+) | SAMN04487947_3311 | Not Available | Positive | 3144826 - 3146112 | 46509.0 |
| phosphoglycerate dehydrogenase | SAMN04487947_3312 | Not Available | Negative | 3146120 - 3147091 | 34917.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
