Halogeometricum rufum strain CGMCC 1.7736

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halogeometricum

Description

Halogeometricum rufum strain CGMCC 1.7736 is a Gram-negative archaeon notable for its unique ecological niche and physiological characteristics. This strain possesses true flagella, which facilitate motility in its saline environment. The presence of flagella is significant as it allows for movement toward optimal conditions in high-salinity habitats, which is essential for survival and growth. Genomically, Halogeometricum rufum has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in extreme environments. The strain is cataloged with the accession number FOYT00000000.1, providing a reference for researchers interested in its genetic makeup and potential applications. The ecological role of Halogeometricum rufum in hypersaline environments is critical. As a member of the microbial communities in such ecosystems, it likely participates in biogeochemical cycles, contributing to the overall functionality and stability of these environments. Its motility and genetic characteristics suggest that it may play a role in nutrient cycling or the degradation of organic materials, although specific functions would need to be elucidated through further research. Understanding the traits of Halogeometricum rufum strain CGMCC 1.7736 can provide insights into microbial life in extreme conditions and the adaptations that enable survival in high-salinity environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalogeometricum
SpeciesHalogeometricum rufum
Strainstrain CGMCC 1.7736

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halogeometricum rufum strain CGMCC 1.7736 genome assembly, contig:

Gene Summary

Adenine Count

677079 bp

Thymine Count

677471 bp

Guanine Count

1416233 bp

Cytosine Count

1416342 bp

Genome Length

4187125 bp

Protein-coding Genes

4155 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitroreductase family proteinSAMN04487947_3293Not AvailablePositive3119943 - 312098337593.8
aldehyde dehydrogenase (nad+)SAMN04487947_3294Not AvailableNegative3121093 - 312255652842.1
2-dehydro-3-deoxy-d-arabinonate dehydrataseSAMN04487947_3295Not AvailablePositive3122645 - 312354432692.9
trehalose 6-phosphate synthaseSAMN04487947_3296Not AvailablePositive3123582 - 312513258945.3
ribose-5-phosphate isomeraseSAMN04487947_3297Not AvailableNegative3125213 - 312608531662.5
6-phosphogluconate dehydrogenaseSAMN04487947_3298Not AvailableNegative3126091 - 312716139358.7
glucoamylase (glucan-1,4-alpha-glucosidase), gh15 familySAMN04487947_3299Not AvailablePositive3127530 - 312942569286.7
nad dependent epimerase/dehydratase family proteinSAMN04487947_3300Not AvailableNegative3129460 - 313025729208.5
hypothetical proteinSAMN04487947_3301Not AvailableNegative3131065 - 313164620941.5
hypothetical proteinSAMN04487947_3302Not AvailableNegative3131861 - 313255623693.3

Displaying genes 3251 – 3260 of 4205 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.