Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucoamylase (glucan-1,4-alpha-glucosidase), gh15 family | SAMN04487947_3243 | Not Available | Positive | 3071957 - 3074005 | 76261.0 |
| hypothetical protein | SAMN04487947_3244 | Not Available | Negative | 3074044 - 3074778 | 26854.8 |
| sugar phosphate isomerase/epimerase | SAMN04487947_3245 | Not Available | Negative | 3074785 - 3075546 | 27911.7 |
| thiaminase (transcriptional activator tena) | SAMN04487947_3246 | Not Available | Positive | 3076110 - 3076775 | 25208.1 |
| thiaminase (transcriptional activator tena) | SAMN04487947_3247 | Not Available | Positive | 3076772 - 3077617 | 31551.9 |
| na+/proline symporter | SAMN04487947_3248 | Not Available | Positive | 3077611 - 3079227 | 55001.1 |
| hypothetical protein | SAMN04487947_3249 | Not Available | Positive | 3079227 - 3079349 | 4191.21 |
| manganese transport protein | SAMN04487947_3250 | Not Available | Positive | 3079389 - 3080714 | 44233.4 |
| hypothetical protein | SAMN04487947_3251 | Not Available | Positive | 3080799 - 3080972 | 6514.51 |
| hypothetical protein | SAMN04487947_3252 | Not Available | Negative | 3081000 - 3081236 | 8377.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
