Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-tyrosine-phosphatase | SAMN04487947_0313 | Not Available | Positive | 293629 - 294084 | 16661.0 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN04487947_0314 | Not Available | Positive | 294081 - 294941 | 29895.9 |
| 23s rrna um-2552 2'-o-methyltransferase | SAMN04487947_0315 | Not Available | Positive | 295025 - 295864 | 30316.2 |
| hypothetical protein | SAMN04487947_0316 | Not Available | Negative | 295919 - 296101 | 6669.95 |
| hypothetical protein | SAMN04487947_0317 | Not Available | Negative | 296162 - 296884 | 25384.1 |
| ribbon-helix-helix protein, copg family | SAMN04487947_0318 | Not Available | Negative | 296877 - 297050 | 6577.6 |
| sec-independent protein translocase protein tatc | SAMN04487947_0319 | Not Available | Negative | 297252 - 299468 | 80844.2 |
| sec-independent protein translocase protein tatc | SAMN04487947_0320 | Not Available | Positive | 299539 - 301155 | 57025.1 |
| carbohydrate abc transporter membrane protein 2, cut1 family (tc 3.a.1.1.-) | SAMN04487947_0321 | Not Available | Negative | 301251 - 302153 | 31945.8 |
| hypothetical protein | SAMN04487947_0322 | Not Available | Negative | 302233 - 302712 | 17595.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
