Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-methylthioadenosine/s-adenosylhomocysteine deaminase | SAMN04487947_0293 | Not Available | Positive | 278071 - 279372 | 45605.0 |
| superoxide dismutase, fe-mn family | SAMN04487947_0294 | Not Available | Positive | 279508 - 280269 | 27740.7 |
| adenosylhomocysteinase | SAMN04487947_0295 | Not Available | Positive | 280394 - 281677 | 46441.1 |
| formiminotetrahydrofolate cyclodeaminase | SAMN04487947_0296 | Not Available | Positive | 281732 - 282319 | 19827.2 |
| hypothetical protein | SAMN04487947_0297 | Not Available | Negative | 282352 - 282513 | 5973.71 |
| hypothetical protein | SAMN04487947_0298 | Not Available | Negative | 282603 - 282800 | 7485.59 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04487947_0299 | Not Available | Negative | 282848 - 283483 | 22870.6 |
| formate/nitrite transporter foca, fnt family | SAMN04487947_0300 | Not Available | Negative | 283553 - 284386 | 28527.8 |
| signal transduction histidine kinase | SAMN04487947_0301 | Not Available | Negative | 284446 - 285972 | 52391.0 |
| holliday junction resolvase | SAMN04487947_0302 | Not Available | Positive | 286096 - 286527 | 15850.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
