Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5,10-methylenetetrahydromethanopterin reductase | SAMN04487947_2981 | Not Available | Negative | 2816050 - 2817057 | 35002.6 |
| coenzyme f420-0 gamma-glutamyl ligase | SAMN04487947_2982 | Not Available | Negative | 2817050 - 2817802 | 27309.8 |
| hypothetical protein | SAMN04487947_2983 | Not Available | Negative | 2817867 - 2818373 | 17538.3 |
| translation initiation factor 2b subunit, eif-2b alpha/beta/delta family | SAMN04487947_2984 | Not Available | Positive | 2818431 - 2819687 | 44027.9 |
| fg-gap repeat-containing protein | SAMN04487947_2985 | Not Available | Positive | 2820082 - 2821353 | 44417.1 |
| pas domain s-box-containing protein | SAMN04487947_2986 | Not Available | Positive | 2821572 - 2822675 | 39224.3 |
| small gtp-binding protein domain-containing protein | SAMN04487947_2987 | Not Available | Negative | 2822668 - 2823288 | 23518.0 |
| hypothetical protein | SAMN04487947_2988 | Not Available | Positive | 2823424 - 2823768 | 12362.9 |
| dhha1 domain-containing protein | SAMN04487947_2989 | Not Available | Positive | 2823850 - 2824863 | 35976.1 |
| 5-formyltetrahydrofolate cyclo-ligase | SAMN04487947_2990 | Not Available | Positive | 2824960 - 2825667 | 25787.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
