Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor 1 (eif-1/sui1) | SAMN04487947_2971 | Not Available | Negative | 2803501 - 2803794 | 10679.5 |
| protein of unknown function | SAMN04487947_2972 | Not Available | Negative | 2803962 - 2806187 | 78907.2 |
| protein of unknown function duf58 | SAMN04487947_2973 | Not Available | Negative | 2806184 - 2807203 | 35976.2 |
| moxr-like atpase | SAMN04487947_2974 | Not Available | Negative | 2807208 - 2808182 | 35302.7 |
| dna mismatch repair protein muts | SAMN04487947_2975 | Not Available | Positive | 2808434 - 2811265 | 101356.0 |
| dna mismatch repair protein mutl | SAMN04487947_2976 | Not Available | Positive | 2811288 - 2813039 | 62321.4 |
| hypothetical protein | SAMN04487947_2977 | Not Available | Negative | 2813055 - 2813444 | 12956.7 |
| predicted arabinose efflux permease, mfs family | SAMN04487947_2978 | Not Available | Positive | 2813532 - 2814761 | 41349.3 |
| formate/nitrite transporter foca, fnt family | SAMN04487947_2979 | Not Available | Negative | 2814827 - 2815771 | 34109.3 |
| hypothetical protein | SAMN04487947_2980 | Not Available | Positive | 2815860 - 2816102 | 8368.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
