Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyhypusine synthase | SAMN04487947_2789 | Not Available | Positive | 2634692 - 2635834 | 41312.4 |
| short c-terminal domain-containing protein | SAMN04487947_2790 | Not Available | Positive | 2635922 - 2636452 | 18906.9 |
| hypothetical protein | SAMN04487947_2791 | Not Available | Positive | 2636566 - 2637801 | 41520.2 |
| predicted oxidoreductase | SAMN04487947_2792 | Not Available | Positive | 2637880 - 2638851 | 36477.1 |
| translation initiation factor 2 subunit beta (aeif-2b) | SAMN04487947_2793 | Not Available | Positive | 2638972 - 2639580 | 22117.5 |
| predicted dna binding protein, contains hth domain | SAMN04487947_2794 | Not Available | Positive | 2639692 - 2640378 | 25382.5 |
| amino acid transporter | SAMN04487947_2795 | Not Available | Positive | 2640470 - 2641870 | 48495.9 |
| succinyl-diaminopimelate desuccinylase | SAMN04487947_2796 | Not Available | Positive | 2641863 - 2643068 | 42838.4 |
| hypothetical protein | SAMN04487947_2797 | Not Available | Positive | 2643305 - 2643580 | 9673.59 |
| thiosulfate dehydrogenase | SAMN04487947_2798 | Not Available | Positive | 2643692 - 2644249 | 20301.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
