Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487947_2758 | Not Available | Negative | 2606185 - 2606643 | 15803.5 |
| nicotinamidase-related amidase | SAMN04487947_2760 | Not Available | Negative | 2606980 - 2607549 | 20662.6 |
| hypothetical protein | SAMN04487947_2761 | Not Available | Negative | 2607542 - 2608360 | 31106.8 |
| solute:na+ symporter, sss family | SAMN04487947_2762 | Not Available | Negative | 2608506 - 2610008 | 53408.5 |
| protein of unknown function | SAMN04487947_2763 | Not Available | Negative | 2610012 - 2610230 | 8563.45 |
| toprim domain-containing protein | SAMN04487947_2764 | Not Available | Positive | 2610570 - 2612207 | 56773.4 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN04487947_2765 | Not Available | Negative | 2612253 - 2612672 | 15005.6 |
| tigr00297 family protein | SAMN04487947_2766 | Not Available | Negative | 2612669 - 2613979 | 43687.4 |
| undecaprenyl diphosphate synthase | SAMN04487947_2767 | Not Available | Positive | 2614132 - 2614740 | 23226.2 |
| predicted nucleic-acid-binding protein, contains zn-ribbon domain | SAMN04487947_2768 | Not Available | Positive | 2614833 - 2615021 | 6521.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
