Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | SAMN04487947_2748 | Not Available | Positive | 2596839 - 2598707 | 66589.0 |
| homoserine kinase | SAMN04487947_2749 | Not Available | Positive | 2598774 - 2599649 | 29682.9 |
| nucleotide-binding universal stress protein, uspa family | SAMN04487947_2750 | Not Available | Positive | 2599776 - 2600261 | 17132.9 |
| pyridoxal 5'-phosphate synthase pdxs subunit | SAMN04487947_2751 | Not Available | Negative | 2600419 - 2601327 | 32526.5 |
| hypothetical protein | SAMN04487947_2752 | Not Available | Negative | 2601381 - 2601767 | 13489.7 |
| uncharacterized membrane protein ypja | SAMN04487947_2753 | Not Available | Positive | 2601967 - 2602719 | 27599.7 |
| hypothetical protein | SAMN04487947_2754 | Not Available | Positive | 2602818 - 2603873 | 38434.7 |
| uncharacterized membrane protein ypja | SAMN04487947_2755 | Not Available | Negative | 2603958 - 2604626 | 24560.8 |
| hypothetical protein | SAMN04487947_2756 | Not Available | Negative | 2604811 - 2605737 | 34886.4 |
| hypothetical protein | SAMN04487947_2757 | Not Available | Negative | 2605815 - 2606135 | 11740.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
