Halogeometricum rufum strain CGMCC 1.7736

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halogeometricum

Description

Halogeometricum rufum strain CGMCC 1.7736 is a Gram-negative archaeon notable for its unique ecological niche and physiological characteristics. This strain possesses true flagella, which facilitate motility in its saline environment. The presence of flagella is significant as it allows for movement toward optimal conditions in high-salinity habitats, which is essential for survival and growth. Genomically, Halogeometricum rufum has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in extreme environments. The strain is cataloged with the accession number FOYT00000000.1, providing a reference for researchers interested in its genetic makeup and potential applications. The ecological role of Halogeometricum rufum in hypersaline environments is critical. As a member of the microbial communities in such ecosystems, it likely participates in biogeochemical cycles, contributing to the overall functionality and stability of these environments. Its motility and genetic characteristics suggest that it may play a role in nutrient cycling or the degradation of organic materials, although specific functions would need to be elucidated through further research. Understanding the traits of Halogeometricum rufum strain CGMCC 1.7736 can provide insights into microbial life in extreme conditions and the adaptations that enable survival in high-salinity environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalogeometricum
SpeciesHalogeometricum rufum
Strainstrain CGMCC 1.7736

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halogeometricum rufum strain CGMCC 1.7736 genome assembly, contig:

Gene Summary

Adenine Count

677079 bp

Thymine Count

677471 bp

Guanine Count

1416233 bp

Cytosine Count

1416342 bp

Genome Length

4187125 bp

Protein-coding Genes

4155 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lsu ribosomal protein l19eSAMN04487947_2626Not AvailablePositive2483981 - 248443617303.1
large subunit ribosomal protein l18SAMN04487947_2627Not AvailablePositive2484436 - 248499020303.6
ssu ribosomal protein s5pSAMN04487947_2628Not AvailablePositive2484987 - 248563423323.6
large subunit ribosomal protein l30SAMN04487947_2629Not AvailablePositive2485634 - 248609817058.9
large subunit ribosomal protein l15SAMN04487947_2630Not AvailablePositive2486095 - 248659818088.4
protein translocase subunit secy/sec61 alphaSAMN04487947_2631Not AvailablePositive2486602 - 248806852586.4
hypothetical membrane proteinSAMN04487947_2632Not AvailablePositive2488503 - 248915922613.1
cubico group peptidase, beta-lactamase class c familySAMN04487947_2633Not AvailablePositive2489272 - 249122771368.3
caax protease self-immunitySAMN04487947_2634Not AvailablePositive2491483 - 249229227951.0
hypothetical proteinSAMN04487947_2635Not AvailablePositive2492568 - 249335329179.2

Displaying genes 2601 – 2610 of 4205 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.