Halogeometricum rufum strain CGMCC 1.7736

Gram-negative

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halogeometricum

Description

Halogeometricum rufum strain CGMCC 1.7736 is a Gram-negative archaeon notable for its unique ecological niche and physiological characteristics. This strain possesses true flagella, which facilitate motility in its saline environment. The presence of flagella is significant as it allows for movement toward optimal conditions in high-salinity habitats, which is essential for survival and growth. Genomically, Halogeometricum rufum has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in extreme environments. The strain is cataloged with the accession number FOYT00000000.1, providing a reference for researchers interested in its genetic makeup and potential applications. The ecological role of Halogeometricum rufum in hypersaline environments is critical. As a member of the microbial communities in such ecosystems, it likely participates in biogeochemical cycles, contributing to the overall functionality and stability of these environments. Its motility and genetic characteristics suggest that it may play a role in nutrient cycling or the degradation of organic materials, although specific functions would need to be elucidated through further research. Understanding the traits of Halogeometricum rufum strain CGMCC 1.7736 can provide insights into microbial life in extreme conditions and the adaptations that enable survival in high-salinity environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalogeometricum
SpeciesHalogeometricum rufum
Strainstrain CGMCC 1.7736

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halogeometricum rufum strain CGMCC 1.7736 genome assembly, contig:

Gene Summary

Adenine Count

677079 bp

Thymine Count

677471 bp

Guanine Count

1416233 bp

Cytosine Count

1416342 bp

Genome Length

4187125 bp

Protein-coding Genes

4155 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isopentenyl-diphosphate delta-isomeraseSAMN04487947_2475Not AvailablePositive2351749 - 235234222669.9
proteasome lid subunit rpn8/rpn11, contains jab1/mpn metalloenzyme (jamm) motifSAMN04487947_2476Not AvailablePositive2352320 - 235279016908.3
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN04487947_2477Not AvailablePositive2352843 - 235355625405.5
hypothetical proteinSAMN04487947_2478Not AvailablePositive2353606 - 235408816548.2
kynureninaseSAMN04487947_2479Not AvailableNegative2354128 - 235544747775.4
acetyl esteraseSAMN04487947_2480Not AvailablePositive2355577 - 235652734001.3
hypothetical proteinSAMN04487947_2481Not AvailableNegative2356534 - 23567437620.8
hydrogenase maturation factorSAMN04487947_2482Not AvailableNegative2356849 - 235786834924.6
pas domain s-box-containing proteinSAMN04487947_2483Not AvailablePositive2358089 - 235918638929.1
pimeloyl-acp methyl ester carboxylesteraseSAMN04487947_2484Not AvailableNegative2359401 - 236031834604.7

Displaying genes 2451 – 2460 of 4205 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.