Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein n-acetyltransferase, rimj/riml family | SAMN04487947_2424 | Not Available | Negative | 2303753 - 2304391 | 24176.7 |
| hypothetical protein | SAMN04487947_2425 | Not Available | Negative | 2304437 - 2304889 | 16718.4 |
| hypothetical protein | SAMN04487947_2426 | Not Available | Positive | 2305132 - 2306157 | 36221.1 |
| protein of unknown function | SAMN04487947_2427 | Not Available | Positive | 2306405 - 2307187 | 27904.9 |
| uncharacterized conserved protein yute, upf0331/duf86 family | SAMN04487947_2428 | Not Available | Negative | 2307413 - 2307841 | 16375.4 |
| predicted nucleotidyltransferase | SAMN04487947_2429 | Not Available | Negative | 2307842 - 2308276 | 16226.5 |
| replication factor c large subunit | SAMN04487947_2430 | Not Available | Positive | 2308418 - 2309911 | 54023.4 |
| f420-dependent oxidoreductase, g6pdh family | SAMN04487947_2431 | Not Available | Positive | 2309960 - 2310907 | 34710.6 |
| alcohol dehydrogenase | SAMN04487947_2432 | Not Available | Positive | 2310965 - 2312026 | 36940.3 |
| hypothetical protein | SAMN04487947_2433 | Not Available | Negative | 2312063 - 2312602 | 17274.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
