Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine dehydrogenase subunit 2 | SAMN04487947_2384 | Not Available | Negative | 2263472 - 2264896 | 51472.6 |
| glycine dehydrogenase subunit 1 | SAMN04487947_2385 | Not Available | Negative | 2264900 - 2266222 | 47572.9 |
| glycine cleavage system h protein | SAMN04487947_2386 | Not Available | Negative | 2266219 - 2266599 | 14004.8 |
| aminomethyltransferase | SAMN04487947_2387 | Not Available | Negative | 2266602 - 2267699 | 40046.5 |
| hypothetical protein | SAMN04487947_2388 | Not Available | Negative | 2267953 - 2268264 | 11280.9 |
| helix-turn-helix domain-containing protein | SAMN04487947_2389 | Not Available | Negative | 2268264 - 2268635 | 14000.0 |
| outer membrane lipoprotein-sorting protein | SAMN04487947_2390 | Not Available | Negative | 2268936 - 2270120 | 42294.4 |
| helix-turn-helix domain-containing protein | SAMN04487947_2391 | Not Available | Positive | 2270312 - 2271271 | 35140.1 |
| hypothetical protein | SAMN04487947_2392 | Not Available | Negative | 2271383 - 2272102 | 28370.5 |
| hypothetical protein | SAMN04487947_2393 | Not Available | Positive | 2272966 - 2273820 | 32025.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
