Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN04487947_2143 | Not Available | Positive | 2039923 - 2040678 | 27256.2 |
| hypothetical protein | SAMN04487947_2144 | Not Available | Negative | 2040766 - 2041590 | 28582.6 |
| substrate-binding protein | SAMN04487947_2145 | Not Available | Negative | 2041753 - 2043075 | 44803.0 |
| uridine kinase | SAMN04487947_2146 | Not Available | Positive | 2043295 - 2043948 | 24617.0 |
| hypothetical protein | SAMN04487947_2147 | Not Available | Negative | 2044000 - 2044362 | 13867.9 |
| Trna-ser | Not Available | Not Available | Positive | 2044565 - 2044647 | Not Available |
| hypothetical protein | SAMN04487947_2149 | Not Available | Negative | 2044689 - 2045450 | 27306.9 |
| hypothetical protein | SAMN04487947_2150 | Not Available | Positive | 2045523 - 2045756 | 7787.82 |
| uracil-dna glycosylase, family 4 | SAMN04487947_2151 | Not Available | Negative | 2045762 - 2046397 | 23830.6 |
| dna polymerase i | SAMN04487947_2152 | Not Available | Negative | 2046476 - 2048638 | 79169.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
